Rerunning A Study

As with re-defining the dataPar.json file, sometimes it is necessary to re-run the ExploreASL pipeline. To do so, it is first necessary to indicate the modules/subjects/sessions/steps that are to be re-run.

This can be achieved by clicking on the Prepare a Re-Run tab located at the top of this module. You will be greeted with an input field for the study root folder for which you'd like to perform a re-run on.

Note

You cannot re-run a study that is currently being processed. If you attempt to do so, you will be greeted with the following error message:

RunEASL_ReRun_StudyAlreadyRunning

Once you have specified the study root folder (and verified that the study is not currently being processed), you will be greeted with the following view:

RunEASL_ReRun_ExampleSelection

The "tree-view" items here directly correspond to the folders/files found under derivatives/ExploreASL/lock. To indicate a re-run, simply select the items that you'd like to have re-evaluated and click the button at the bottom of the screen.

You can then proceed back to the Run ExploreASL tab and re-run that study.